Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | EBF16_RS23085 | Not Available | Positive | 4109251 - 4109781 | 19876.6 |
| lysophospholipid acyltransferase family protein | EBF16_RS23090 | Not Available | Positive | 4109785 - 4110477 | 25054.1 |
| prephenate/arogenate dehydrogenase family protein | EBF16_RS23095 | Not Available | Negative | 4110572 - 4111477 | 32523.7 |
| histidinol-phosphate transaminase | EBF16_RS23100 | Not Available | Negative | 4111482 - 4112591 | 39119.2 |
| acid phosphatase | EBF16_RS23105 | Not Available | Negative | 4112638 - 4113429 | 28394.0 |
| tetr/acrr family transcriptional regulator | EBF16_RS23110 | Not Available | Negative | 4113531 - 4114157 | 23159.2 |
| tonb-dependent receptor | EBF16_RS23115 | Not Available | Positive | 4114332 - 4116689 | 84439.7 |
| spinster family mfs transporter | EBF16_RS23120 | Not Available | Positive | 4116792 - 4118042 | 43755.5 |
| peptide chain release factor 3 | EBF16_RS23125 | Not Available | Negative | 4118087 - 4119664 | 58307.6 |
| aldose 1-epimerase family protein | EBF16_RS23130 | Not Available | Negative | 4119810 - 4120691 | 32626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
