Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent dehydrogenase, methanol/ethanol family | EBF16_RS22935 | Not Available | Negative | 4081368 - 4083455 | 74114.8 |
| fadr/gntr family transcriptional regulator | EBF16_RS22940 | Not Available | Negative | 4083610 - 4084395 | 28178.5 |
| peptidoglycan editing factor pgef | EBF16_RS22945 | Not Available | Negative | 4084440 - 4085201 | 26737.8 |
| amino acid permease | EBF16_RS22950 | Not Available | Positive | 4085354 - 4086916 | 54393.5 |
| duf2946 family protein | EBF16_RS22955 | Not Available | Positive | 4087045 - 4087443 | 13876.4 |
| tonb-dependent receptor | EBF16_RS22960 | Not Available | Positive | 4087529 - 4089697 | 77428.2 |
| multidrug effflux mfs transporter | EBF16_RS22965 | Not Available | Negative | 4089806 - 4091077 | 45774.2 |
| sel1-like repeat protein | EBF16_RS22970 | Not Available | Positive | 4091315 - 4091611 | 10377.3 |
| gnat family n-acetyltransferase | EBF16_RS22975 | Not Available | Negative | 4091612 - 4092745 | 42061.4 |
| glycerophosphodiester phosphodiesterase family protein | EBF16_RS22980 | Not Available | Negative | 4092742 - 4093398 | 23601.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
