Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS22485 | Not Available | Positive | 3985465 - 3985773 | 10613.3 |
| pepsy-associated tm helix domain-containing protein | EBF16_RS22490 | Not Available | Positive | 3985770 - 3987284 | 54450.2 |
| duf3325 family protein | EBF16_RS22495 | Not Available | Positive | 3987281 - 3987595 | 10606.7 |
| atp-binding protein | EBF16_RS22500 | Not Available | Negative | 3987592 - 3988962 | 49536.9 |
| response regulator | EBF16_RS22505 | Not Available | Negative | 3988959 - 3989687 | 27105.8 |
| efflux rnd transporter periplasmic adaptor subunit | EBF16_RS22510 | Not Available | Positive | 3989885 - 3991018 | 39952.2 |
| efflux rnd transporter permease subunit | EBF16_RS22515 | Not Available | Positive | 3991029 - 3994190 | 112939.0 |
| efflux transporter outer membrane subunit | EBF16_RS22520 | Not Available | Positive | 3994187 - 3995557 | 48766.8 |
| alpha-amylase family glycosyl hydrolase | EBF16_RS22525 | Not Available | Positive | 3995860 - 3997476 | 59786.3 |
| nad(p)h-dependent flavin oxidoreductase | EBF16_RS22530 | Not Available | Negative | 3997478 - 3998476 | 35297.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
