Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EBF16_RS22435 | Not Available | Negative | 3971431 - 3972207 | 27974.3 |
| c-type cytochrome | EBF16_RS22440 | Not Available | Negative | 3972275 - 3972712 | 15204.2 |
| amp-binding protein | EBF16_RS22445 | Not Available | Negative | 3972762 - 3974390 | 58257.8 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | EBF16_RS22450 | Not Available | Positive | 3974545 - 3976044 | 53492.3 |
| acetyl-coa hydrolase/transferase family protein | EBF16_RS22455 | Not Available | Positive | 3976174 - 3977508 | 47208.8 |
| thioesterase family protein | EBF16_RS22460 | Not Available | Negative | 3977509 - 3978279 | 27346.8 |
| endonuclease/exonuclease/phosphatase family protein | EBF16_RS22465 | Not Available | Positive | 3978478 - 3979563 | 38411.2 |
| tonb-dependent receptor domain-containing protein | EBF16_RS22470 | Not Available | Positive | 3979560 - 3980729 | 41822.5 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | EBF16_RS22475 | Not Available | Negative | 3980754 - 3983147 | 86110.8 |
| tonb-dependent siderophore receptor | EBF16_RS22480 | Not Available | Positive | 3983345 - 3985468 | 78097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
