Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6-like element is6100 family transposase | EBF16_RS01780 | Not Available | Positive | 346289 - 347053 | 29684.0 |
| hypothetical protein | EBF16_RS01790 | Not Available | Positive | 347121 - 347387 | 9742.56 |
| abc transporter permease | EBF16_RS01795 | Not Available | Negative | 347396 - 348526 | 41521.6 |
| ribosome-associated atpase/putative transporter rbba | EBF16_RS01800 | Not Available | Negative | 348526 - 351243 | 99504.5 |
| hlyd family secretion protein | EBF16_RS01805 | Not Available | Negative | 351272 - 352348 | 38134.8 |
| efflux transporter outer membrane subunit | EBF16_RS01810 | Not Available | Negative | 352345 - 353886 | 56132.7 |
| hypothetical protein | EBF16_RS01815 | Not Available | Negative | 353944 - 354357 | 15077.6 |
| acetoacetyl-coa reductase | EBF16_RS01820 | Not Available | Negative | 354440 - 355168 | 25665.9 |
| tetr/acrr family transcriptional regulator | EBF16_RS01825 | Not Available | Positive | 355285 - 356070 | 28805.7 |
| pha/phb synthase family protein | EBF16_RS01830 | Not Available | Positive | 356060 - 357811 | 64389.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
