Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | EBF16_RS01635 | Not Available | Positive | 317301 - 320258 | 110186.0 |
| hypothetical protein | EBF16_RS01640 | Not Available | Negative | 320529 - 321020 | 17252.5 |
| abc-type transport auxiliary lipoprotein family protein | EBF16_RS01645 | Not Available | Negative | 321048 - 321641 | 21376.6 |
| mlad family protein | EBF16_RS01650 | Not Available | Negative | 321638 - 322573 | 33273.5 |
| abc transporter atp-binding protein | EBF16_RS01655 | Not Available | Negative | 322574 - 323341 | 28051.6 |
| mlae family abc transporter permease | EBF16_RS01660 | Not Available | Negative | 323341 - 324438 | 38959.5 |
| mlad family protein | EBF16_RS01665 | Not Available | Positive | 324611 - 325558 | 32799.3 |
| tetr/acrr family transcriptional regulator | EBF16_RS01670 | Not Available | Positive | 325682 - 326362 | 25135.1 |
| abc1 kinase family protein | EBF16_RS01675 | Not Available | Positive | 326362 - 327960 | 57359.6 |
| sigma-70 family rna polymerase sigma factor | EBF16_RS01680 | Not Available | Positive | 328142 - 328819 | 25555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
