Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein cheb | EBF16_RS00010 | Not Available | Positive | 414 - 980 | 19194.3 |
| hybrid sensor histidine kinase/response regulator | EBF16_RS00015 | Not Available | Positive | 977 - 2116 | 41912.6 |
| tyrosine-type recombinase/integrase | EBF16_RS00020 | Not Available | Negative | 2267 - 3394 | 41263.6 |
| swt1 family hepn domain-containing protein | EBF16_RS00025 | Not Available | Negative | 3391 - 4698 | 48249.8 |
| is6 family transposase | EBF16_RS00030 | Not Available | Negative | 4734 - 5498 | 29582.9 |
| tonb-dependent receptor | EBF16_RS00035 | Not Available | Positive | 5772 - 8573 | 98404.8 |
| yggs family pyridoxal phosphate-dependent enzyme | EBF16_RS00040 | Not Available | Negative | 8551 - 9285 | 25893.2 |
| thiamine phosphate synthase | EBF16_RS00045 | Not Available | Positive | 9309 - 9920 | 22619.8 |
| 3'-5' exonuclease | EBF16_RS00050 | Not Available | Negative | 10463 - 11551 | 40057.3 |
| strawberry notch c-terminal domain-containing protein | EBF16_RS00140 | Not Available | Positive | 31639 - 33363 | 63462.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
