Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | EBF16_RS01410 | Not Available | Negative | 280269 - 280880 | 21335.2 |
| nad(p)h:quinone oxidoreductase | EBF16_RS01415 | Not Available | Negative | 280938 - 281537 | 20807.7 |
| is256-like element isspwi2 family transposase | EBF16_RS01420 | Not Available | Positive | 281761 - 282984 | 45801.1 |
| pirin family protein | EBF16_RS01425 | Not Available | Positive | 283171 - 284070 | 33097.1 |
| ycii family protein | EBF16_RS29150 | Not Available | Negative | 284135 - 284707 | 21606.2 |
| atp-binding protein | EBF16_RS01435 | Not Available | Positive | 284873 - 285586 | 27795.7 |
| is256-like element isspwi2 family transposase | EBF16_RS01440 | Not Available | Negative | 285628 - 286851 | 45801.1 |
| atp-binding protein | EBF16_RS01445 | Not Available | Positive | 287103 - 287249 | 5412.35 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS01460 | Not Available | Positive | 288089 - 288463 | 13961.4 |
| helix-turn-helix domain-containing protein | EBF16_RS01465 | Not Available | Positive | 288460 - 288786 | 11793.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
