Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EBF16_RS01360 | Not Available | Positive | 270401 - 271300 | 33791.6 |
| hydroxyquinol 1,2-dioxygenase | EBF16_RS01365 | Not Available | Positive | 271559 - 272071 | 18555.9 |
| hydroxyquinol 1,2-dioxygenase | EBF16_RS01370 | Not Available | Positive | 272117 - 273142 | 38200.9 |
| outer membrane beta-barrel protein | EBF16_RS01375 | Not Available | Positive | 273610 - 274596 | 36243.4 |
| aldehyde dehydrogenase family protein | EBF16_RS01380 | Not Available | Positive | 274643 - 276106 | 52289.0 |
| maleylacetate reductase | EBF16_RS01385 | Not Available | Positive | 276112 - 277170 | 37075.4 |
| dioxygenase | EBF16_RS01390 | Not Available | Positive | 277167 - 277994 | 29727.4 |
| rieske (2fe-2s) protein | EBF16_RS01395 | Not Available | Positive | 278001 - 278396 | 15027.0 |
| ycei family protein | EBF16_RS01400 | Not Available | Negative | 278989 - 279570 | 20502.4 |
| cytochrome b | EBF16_RS01405 | Not Available | Negative | 279575 - 280165 | 21696.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
