Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg family ribbon-helix-helix protein | EBF16_RS01310 | Not Available | Negative | 260140 - 260418 | 10741.6 |
| hypothetical protein | EBF16_RS29535 | Not Available | Positive | 260783 - 260905 | 4596.54 |
| is6-like element is6100 family transposase | EBF16_RS01315 | Not Available | Negative | 260968 - 261732 | 29742.0 |
| heavy-metal-associated domain-containing protein | EBF16_RS01325 | Not Available | Positive | 261816 - 262145 | 11000.3 |
| mercury(ii) reductase | EBF16_RS01330 | Not Available | Positive | 262183 - 263601 | 48772.0 |
| tn3 family transposase | EBF16_RS01335 | Not Available | Positive | 263693 - 266662 | 109421.0 |
| iclr family transcriptional regulator c-terminal domain-containing protein | EBF16_RS01340 | Not Available | Negative | 266823 - 267593 | 27436.3 |
| 3-oxoadipyl-coa thiolase | EBF16_RS01345 | Not Available | Negative | 267662 - 268864 | 41360.8 |
| 3-oxoacid coa-transferase subunit b | EBF16_RS01350 | Not Available | Negative | 268864 - 269541 | 23644.4 |
| coa transferase subunit a | EBF16_RS01355 | Not Available | Negative | 269538 - 270248 | 25764.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
