Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6-like element is6100 family transposase | EBF16_RS01260 | Not Available | Negative | 252838 - 253602 | 29742.0 |
| pseudoazurin | EBF16_RS01265 | Not Available | Positive | 253709 - 254146 | 15070.7 |
| nad(p)-dependent alcohol dehydrogenase | EBF16_RS01270 | Not Available | Positive | 254265 - 255389 | 39623.9 |
| aldehyde dehydrogenase family protein | EBF16_RS01275 | Not Available | Positive | 255488 - 256945 | 52451.5 |
| hypothetical protein | EBF16_RS01280 | Not Available | Negative | 257070 - 257555 | 18579.4 |
| hypothetical protein | EBF16_RS01285 | Not Available | Negative | 257606 - 257848 | 8578.16 |
| tetr/acrr family transcriptional regulator | EBF16_RS01290 | Not Available | Positive | 257925 - 258623 | 25393.5 |
| hypothetical protein | EBF16_RS01295 | Not Available | Positive | 259176 - 259433 | 8903.78 |
| type ii toxin-antitoxin system pemk/mazf family toxin | EBF16_RS01300 | Not Available | Positive | 259430 - 259756 | 11932.6 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS01305 | Not Available | Negative | 259859 - 260152 | 10768.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
