Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EBF16_RS01000 | Not Available | Positive | 203762 - 204169 | 15199.4 |
| cora family divalent cation transporter | EBF16_RS29135 | Not Available | Negative | 204232 - 204390 | 5904.46 |
| hypothetical protein | EBF16_RS29140 | Not Available | Negative | 204409 - 204894 | 17993.9 |
| sdr family oxidoreductase | EBF16_RS01010 | Not Available | Negative | 205146 - 205976 | 29445.0 |
| tetr family transcriptional regulator | EBF16_RS01015 | Not Available | Positive | 206046 - 206612 | 20744.0 |
| tonb-dependent receptor domain-containing protein | EBF16_RS01020 | Not Available | Positive | 207351 - 210053 | 95821.6 |
| pepsy domain-containing protein | EBF16_RS01025 | Not Available | Positive | 210064 - 210768 | 26678.6 |
| pepsy domain-containing protein | EBF16_RS01030 | Not Available | Positive | 210765 - 211499 | 27483.3 |
| histidine utilization repressor | EBF16_RS01035 | Not Available | Negative | 211503 - 212192 | 25704.9 |
| duf411 domain-containing protein | EBF16_RS01040 | Not Available | Negative | 212384 - 212821 | 15107.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
