Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EBF16_RS00850 | Not Available | Negative | 174370 - 175002 | 22824.3 |
| hypothetical protein | EBF16_RS00860 | Not Available | Negative | 175612 - 176160 | 19096.6 |
| duf4142 domain-containing protein | EBF16_RS00865 | Not Available | Negative | 176338 - 176919 | 20680.7 |
| hypothetical protein | EBF16_RS00870 | Not Available | Negative | 177144 - 177671 | 18983.0 |
| is110 family transposase | EBF16_RS00875 | Not Available | Positive | 177655 - 178689 | 37808.6 |
| is256-like element isspwi2 family transposase | EBF16_RS00880 | Not Available | Negative | 179190 - 180413 | 45801.1 |
| atp-binding protein | EBF16_RS00885 | Not Available | Positive | 180465 - 180947 | 18159.1 |
| efflux rnd transporter permease subunit | EBF16_RS00890 | Not Available | Positive | 180963 - 181949 | 34656.7 |
| efflux transporter outer membrane subunit | EBF16_RS00895 | Not Available | Positive | 181946 - 183322 | 47829.7 |
| response regulator transcription factor | EBF16_RS00900 | Not Available | Positive | 183330 - 184007 | 24711.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
