Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EBF16_RS00805 | Not Available | Negative | 163825 - 166035 | 79414.8 |
| spinster family mfs transporter | EBF16_RS00810 | Not Available | Negative | 166119 - 167441 | 45730.7 |
| hypothetical protein | EBF16_RS00815 | Not Available | Negative | 167444 - 167875 | 16138.7 |
| is6 family transposase | EBF16_RS00820 | Not Available | Positive | 167909 - 168673 | 29582.9 |
| atp-binding protein | EBF16_RS00825 | Not Available | Positive | 168771 - 171086 | 85855.6 |
| globin domain-containing protein | EBF16_RS00830 | Not Available | Negative | 171276 - 171722 | 16354.8 |
| sensor histidine kinase | EBF16_RS00835 | Not Available | Negative | 171872 - 172474 | 21895.3 |
| response regulator | EBF16_RS00840 | Not Available | Positive | 172649 - 172987 | 11734.0 |
| hypothetical protein | EBF16_RS29530 | Not Available | Negative | 172984 - 173112 | 4331.03 |
| ggdef domain-containing protein | EBF16_RS00845 | Not Available | Negative | 173146 - 174063 | 33307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
