Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yoak family protein | EBF16_RS08595 | Not Available | Positive | 962332 - 962976 | 21884.3 |
| type i dna topoisomerase | EBF16_RS08600 | Not Available | Positive | 963041 - 965623 | 94343.4 |
| abc1 kinase family protein | EBF16_RS08605 | Not Available | Negative | 965655 - 967154 | 53993.6 |
| gtpase era | EBF16_RS08610 | Not Available | Negative | 967208 - 968116 | 33423.3 |
| ribonuclease iii | EBF16_RS08615 | Not Available | Negative | 968190 - 968870 | 24172.7 |
| signal peptidase i | EBF16_RS08620 | Not Available | Negative | 968870 - 969694 | 30151.2 |
| glucose-6-phosphate isomerase | EBF16_RS08625 | Not Available | Positive | 969884 - 971383 | 53362.4 |
| glutathione-disulfide reductase | EBF16_RS08630 | Not Available | Positive | 971582 - 972928 | 48554.1 |
| 2og-fe dioxygenase family protein | EBF16_RS08635 | Not Available | Negative | 973012 - 973746 | 27086.7 |
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS08640 | Not Available | Negative | 973900 - 974685 | 27640.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
