Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccmh | EBF16_RS08445 | Not Available | Positive | 930342 - 930752 | 15372.0 |
| tetratricopeptide repeat protein | EBF16_RS08450 | Not Available | Positive | 930749 - 931390 | 22823.7 |
| potassium transporter kup | EBF16_RS08455 | Not Available | Positive | 931524 - 933446 | 69798.5 |
| pa0069 family radical sam protein | EBF16_RS08460 | Not Available | Negative | 933453 - 934520 | 39331.3 |
| ybjn domain-containing protein | EBF16_RS08465 | Not Available | Positive | 934607 - 935119 | 18516.9 |
| molybdenum cofactor biosynthesis protein b | EBF16_RS08470 | Not Available | Negative | 935275 - 935802 | 19062.7 |
| lytic transglycosylase domain-containing protein | EBF16_RS08475 | Not Available | Negative | 935802 - 937589 | 64304.7 |
| uracil-dna glycosylase family protein | EBF16_RS08480 | Not Available | Negative | 937586 - 938368 | 28003.8 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | EBF16_RS08485 | Not Available | Positive | 938450 - 940102 | 60578.5 |
| tetratricopeptide repeat protein | EBF16_RS08490 | Not Available | Positive | 940128 - 941744 | 56635.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
