Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | EBF16_RS08395 | Not Available | Negative | 920764 - 921249 | 18587.3 |
| cryptochrome/photolyase family protein | EBF16_RS08400 | Not Available | Positive | 921439 - 922815 | 52249.9 |
| sam-dependent methyltransferase | EBF16_RS08405 | Not Available | Positive | 922853 - 924121 | 47977.1 |
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS08410 | Not Available | Negative | 924118 - 924834 | 24434.4 |
| amidophosphoribosyltransferase | EBF16_RS08415 | Not Available | Negative | 924931 - 926409 | 53814.4 |
| heme abc transporter permease ccmc | EBF16_RS08420 | Not Available | Positive | 926594 - 927316 | 26220.8 |
| heme exporter protein ccmd | EBF16_RS08425 | Not Available | Positive | 927319 - 927450 | 4754.71 |
| cytochrome c maturation protein ccme | EBF16_RS08430 | Not Available | Positive | 927447 - 927893 | 15764.1 |
| heme lyase ccmf/nrfe family subunit | EBF16_RS08435 | Not Available | Positive | 927890 - 929818 | 69027.7 |
| redoxin family protein | EBF16_RS08440 | Not Available | Positive | 929815 - 930342 | 18840.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
