Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-deoxyinosine glycosylase | EBF16_RS08250 | Not Available | Negative | 892106 - 892633 | 19033.8 |
| redox-regulated atpase ychf | EBF16_RS08255 | Not Available | Negative | 892638 - 893738 | 39268.7 |
| hypothetical protein | EBF16_RS29255 | Not Available | Negative | 893778 - 894137 | 13280.4 |
| hypothetical protein | EBF16_RS08260 | Not Available | Positive | 894132 - 895367 | 46377.2 |
| duf2490 domain-containing protein | EBF16_RS08265 | Not Available | Negative | 895377 - 896087 | 26090.1 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | EBF16_RS08270 | Not Available | Negative | 896154 - 897782 | 57031.3 |
| linear amide c-n hydrolase | EBF16_RS08275 | Not Available | Positive | 898008 - 899063 | 38355.4 |
| hypothetical protein | EBF16_RS08280 | Not Available | Positive | 899082 - 899888 | 29814.5 |
| aminoacyl-trna hydrolase | EBF16_RS08285 | Not Available | Negative | 899895 - 900464 | 21039.4 |
| 50s ribosomal protein l25/general stress protein ctc | EBF16_RS08290 | Not Available | Negative | 900553 - 901164 | 21680.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
