Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | EBF16_RS08025 | Not Available | Negative | 846147 - 848126 | 72667.6 |
| outer membrane protein | EBF16_RS08030 | Not Available | Positive | 848280 - 849122 | 29601.1 |
| m48 family metalloprotease | EBF16_RS08035 | Not Available | Positive | 849238 - 850416 | 43252.9 |
| gcra family cell cycle regulator | EBF16_RS08040 | Not Available | Negative | 850468 - 851157 | 23752.5 |
| abc transporter permease | EBF16_RS08045 | Not Available | Positive | 851271 - 852119 | 30467.1 |
| udp-glucose dehydrogenase family protein | EBF16_RS08050 | Not Available | Negative | 852244 - 853563 | 46074.5 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | EBF16_RS08055 | Not Available | Positive | 853721 - 854857 | 40305.7 |
| udp-n-acetyl-d-mannosamine dehydrogenase | EBF16_RS08060 | Not Available | Positive | 854929 - 856224 | 46582.2 |
| polysaccharide biosynthesis/export family protein | EBF16_RS08065 | Not Available | Positive | 856342 - 857070 | 24977.6 |
| gumc family protein | EBF16_RS08070 | Not Available | Positive | 857070 - 859214 | 76890.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
