Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosyltransferase | EBF16_RS00705 | Not Available | Negative | 139109 - 139699 | 21379.3 |
| tyrosine-type recombinase/integrase | EBF16_RS00710 | Not Available | Negative | 139696 - 140823 | 41156.4 |
| gnat family n-acetyltransferase | EBF16_RS00715 | Not Available | Negative | 140820 - 141347 | 19762.8 |
| abrb/maze/spovt family dna-binding domain-containing protein | EBF16_RS00720 | Not Available | Positive | 141569 - 141811 | 8484.09 |
| type ii toxin-antitoxin system vapc family toxin | EBF16_RS00725 | Not Available | Positive | 141808 - 142197 | 13356.4 |
| nacht domain-containing protein | EBF16_RS00730 | Not Available | Positive | 142199 - 146737 | 167648.0 |
| aaa family atpase | EBF16_RS00735 | Not Available | Positive | 146853 - 148058 | 44783.5 |
| rlob domain-containing protein | EBF16_RS00740 | Not Available | Positive | 148055 - 148630 | 20656.1 |
| hu family dna-binding protein | EBF16_RS00745 | Not Available | Positive | 148653 - 148928 | 9286.02 |
| hypothetical protein | EBF16_RS00750 | Not Available | Positive | 148976 - 149440 | 17174.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
