Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | EBF16_RS07975 | Not Available | Positive | 836022 - 837539 | 54479.3 |
| terc family protein | EBF16_RS07980 | Not Available | Positive | 837681 - 838661 | 36338.5 |
| dna repair protein reco | EBF16_RS07985 | Not Available | Positive | 838700 - 839434 | 25715.2 |
| 3-isopropylmalate dehydrogenase | EBF16_RS07990 | Not Available | Positive | 839555 - 840598 | 36756.2 |
| hypothetical protein | EBF16_RS07995 | Not Available | Positive | 840684 - 841100 | 16276.7 |
| threonine dehydratase | EBF16_RS08000 | Not Available | Positive | 841285 - 842283 | 35199.1 |
| trans-sulfuration enzyme family protein | EBF16_RS08005 | Not Available | Positive | 842280 - 843488 | 43242.6 |
| co2+/mg2+ efflux protein apag | EBF16_RS08010 | Not Available | Positive | 843521 - 843919 | 14661.4 |
| lysr family transcriptional regulator | EBF16_RS08015 | Not Available | Positive | 843916 - 844707 | 27877.6 |
| serine hydrolase | EBF16_RS08020 | Not Available | Negative | 844876 - 846150 | 45723.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
