Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske 2fe-2s domain-containing protein | EBF16_RS07775 | Not Available | Positive | 797991 - 799340 | 50963.8 |
| benzoate 1,2-dioxygenase small subunit | EBF16_RS07780 | Not Available | Positive | 799337 - 799852 | 20113.6 |
| benzoate diol dehydrogenase bend | EBF16_RS07785 | Not Available | Positive | 799863 - 800648 | 26929.4 |
| coa transferase subunit a | EBF16_RS07790 | Not Available | Positive | 800662 - 801369 | 25864.0 |
| 3-oxoacid coa-transferase subunit b | EBF16_RS07795 | Not Available | Positive | 801369 - 802016 | 22237.2 |
| 2fe-2s iron-sulfur cluster-binding protein | EBF16_RS07800 | Not Available | Positive | 802030 - 802347 | 11074.0 |
| 3-oxoadipate enol-lactonase | EBF16_RS07805 | Not Available | Positive | 802350 - 803120 | 26922.3 |
| 3-oxoadipyl-coa thiolase | EBF16_RS07810 | Not Available | Positive | 803126 - 804328 | 41503.9 |
| nad(p)/fad-dependent oxidoreductase | EBF16_RS07815 | Not Available | Positive | 804334 - 805563 | 43589.5 |
| marr family winged helix-turn-helix transcriptional regulator | EBF16_RS07820 | Not Available | Negative | 805932 - 806543 | 22899.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
