Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | EBF16_RS07680 | Not Available | Negative | 777640 - 778380 | 27452.6 |
| sulfotransferase | EBF16_RS07685 | Not Available | Negative | 778332 - 779351 | 38331.6 |
| glycosyltransferase family 4 protein | EBF16_RS07690 | Not Available | Negative | 779353 - 780510 | 41402.0 |
| glycosyl transferase | EBF16_RS07695 | Not Available | Negative | 780503 - 781738 | 45826.0 |
| nuclear transport factor 2 family protein | EBF16_RS07700 | Not Available | Negative | 781879 - 782367 | 17940.4 |
| l,d-transpeptidase | EBF16_RS07705 | Not Available | Negative | 782489 - 783499 | 36819.1 |
| lysr family transcriptional regulator | EBF16_RS07710 | Not Available | Positive | 783739 - 784623 | 31868.5 |
| alpha/beta fold hydrolase | EBF16_RS07715 | Not Available | Positive | 784748 - 785722 | 36319.4 |
| pyridoxamine 5'-phosphate oxidase family protein | EBF16_RS07720 | Not Available | Positive | 785784 - 786413 | 23933.3 |
| duf1348 family protein | EBF16_RS07725 | Not Available | Positive | 786413 - 786883 | 18352.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
