Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS07530 | Not Available | Negative | 741474 - 741983 | 19483.9 |
| arylsulfatase | EBF16_RS07535 | Not Available | Positive | 742224 - 743768 | 57639.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EBF16_RS07540 | Not Available | Negative | 743868 - 746633 | 98907.9 |
| tonb-dependent receptor domain-containing protein | EBF16_RS07545 | Not Available | Positive | 747074 - 749209 | 76116.3 |
| prolyl hydroxylase family protein | EBF16_RS07550 | Not Available | Negative | 749351 - 750010 | 24404.7 |
| type ii secretion system protein n | EBF16_RS07555 | Not Available | Positive | 750195 - 751055 | 29524.3 |
| type ii secretion system secretin gspd | EBF16_RS07560 | Not Available | Positive | 751052 - 753298 | 77968.7 |
| type ii secretion system atpase gspe | EBF16_RS07565 | Not Available | Positive | 753322 - 754836 | 54512.7 |
| type ii secretion system inner membrane protein gspf | EBF16_RS07570 | Not Available | Positive | 754829 - 756046 | 44028.8 |
| type ii secretion system major pseudopilin gspg | EBF16_RS07575 | Not Available | Positive | 756058 - 756531 | 17054.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
