Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EBF16_RS00655 | Not Available | Positive | 130976 - 131533 | 19575.3 |
| duf1349 domain-containing protein | EBF16_RS00660 | Not Available | Positive | 131565 - 132248 | 25096.8 |
| short chain dehydrogenase | EBF16_RS00665 | Not Available | Positive | 132282 - 132887 | 21344.9 |
| hypothetical protein | EBF16_RS00670 | Not Available | Negative | 132988 - 133218 | 8396.57 |
| duf305 domain-containing protein | EBF16_RS00675 | Not Available | Negative | 133417 - 133719 | 11201.2 |
| heavy-metal-associated domain-containing protein | EBF16_RS00680 | Not Available | Negative | 133716 - 133934 | 7698.87 |
| heavy metal translocating p-type atpase | EBF16_RS00685 | Not Available | Positive | 134095 - 136605 | 87065.4 |
| cu(i)-responsive transcriptional regulator | EBF16_RS00690 | Not Available | Positive | 136602 - 137054 | 16665.9 |
| mfs transporter | EBF16_RS00695 | Not Available | Positive | 137172 - 138344 | 39926.9 |
| hypothetical protein | EBF16_RS00700 | Not Available | Negative | 138348 - 139112 | 29096.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
