Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS07380 | Not Available | Negative | 707570 - 710245 | 96265.2 |
| hpt domain-containing protein | EBF16_RS07385 | Not Available | Positive | 710327 - 710629 | 10592.7 |
| hypothetical protein | EBF16_RS07390 | Not Available | Positive | 710718 - 711890 | 40546.9 |
| duf2336 domain-containing protein | EBF16_RS07395 | Not Available | Positive | 711968 - 713053 | 38174.3 |
| sensor histidine kinase | EBF16_RS07400 | Not Available | Positive | 713050 - 714441 | 50183.2 |
| gamma-glutamylcyclotransferase | EBF16_RS07405 | Not Available | Positive | 714518 - 714859 | 12050.1 |
| citrate synthase | EBF16_RS07410 | Not Available | Negative | 714920 - 716206 | 47369.6 |
| glutamate--trna ligase | EBF16_RS07415 | Not Available | Negative | 716227 - 717669 | 53083.3 |
| comec/rec2 family competence protein | EBF16_RS07420 | Not Available | Positive | 717719 - 719851 | 75315.1 |
| transcriptional repressor lexa | EBF16_RS07425 | Not Available | Negative | 719842 - 720519 | 24674.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
