Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS07330 | Not Available | Positive | 695184 - 695996 | 29074.7 |
| duf2322 family protein | EBF16_RS07335 | Not Available | Positive | 696084 - 696413 | 11282.5 |
| transcription-repair coupling factor | EBF16_RS07340 | Not Available | Negative | 696814 - 700290 | 126923.0 |
| succinate dehydrogenase assembly factor 2 | EBF16_RS07345 | Not Available | Negative | 700418 - 700684 | 10613.5 |
| atp-dependent dna helicase recg | EBF16_RS07350 | Not Available | Positive | 700772 - 702835 | 74840.7 |
| cpbp family intramembrane glutamic endopeptidase | EBF16_RS07355 | Not Available | Positive | 702888 - 703601 | 25879.7 |
| mechanosensitive ion channel family protein | EBF16_RS07360 | Not Available | Positive | 703692 - 704768 | 39880.6 |
| pilz domain-containing protein | EBF16_RS07365 | Not Available | Negative | 704740 - 705096 | 13306.4 |
| tyrosine--trna ligase | EBF16_RS07370 | Not Available | Negative | 705173 - 706390 | 44260.9 |
| anhydro-n-acetylmuramic acid kinase | EBF16_RS07375 | Not Available | Positive | 706446 - 707531 | 37386.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
