Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | EBF16_RS07190 | Not Available | Positive | 667080 - 668255 | 42077.9 |
| nad(p)-dependent oxidoreductase | EBF16_RS07195 | Not Available | Positive | 668260 - 669204 | 33641.4 |
| lysr substrate-binding domain-containing protein | EBF16_RS07200 | Not Available | Negative | 669223 - 670059 | 30351.7 |
| abc transporter permease | EBF16_RS07205 | Not Available | Positive | 670325 - 671143 | 29336.9 |
| abc transporter atp-binding protein | EBF16_RS07210 | Not Available | Positive | 671146 - 671937 | 28492.3 |
| cysteine dioxygenase | EBF16_RS07215 | Not Available | Positive | 671934 - 672548 | 22497.5 |
| rhodanese-like domain-containing protein | EBF16_RS07220 | Not Available | Positive | 672545 - 673807 | 46389.6 |
| llm class flavin-dependent oxidoreductase | EBF16_RS07225 | Not Available | Positive | 673829 - 674917 | 39289.3 |
| abc transporter substrate-binding protein | EBF16_RS07230 | Not Available | Positive | 674919 - 675872 | 33400.9 |
| class ii aldolase/adducin family protein | EBF16_RS07235 | Not Available | Positive | 675890 - 676681 | 29135.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
