Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | EBF16_RS07080 | Not Available | Positive | 638128 - 639906 | 65151.7 |
| vit family protein | EBF16_RS07085 | Not Available | Positive | 639974 - 640687 | 24123.2 |
| glutathione peroxidase | EBF16_RS07090 | Not Available | Positive | 640727 - 641272 | 19360.0 |
| m20/m25/m40 family metallo-hydrolase | EBF16_RS07095 | Not Available | Positive | 641371 - 642687 | 45723.0 |
| trimeric intracellular cation channel family protein | EBF16_RS07100 | Not Available | Positive | 642741 - 643385 | 22168.6 |
| amidohydrolase | EBF16_RS07105 | Not Available | Negative | 643405 - 644853 | 50579.1 |
| tonb-dependent receptor domain-containing protein | EBF16_RS07110 | Not Available | Positive | 645094 - 648111 | 108238.0 |
| zinc-dependent metalloprotease | EBF16_RS07115 | Not Available | Positive | 648174 - 650645 | 88403.3 |
| cia30 family protein | EBF16_RS07120 | Not Available | Positive | 650671 - 652467 | 62804.0 |
| m14 metallopeptidase family protein | EBF16_RS07125 | Not Available | Positive | 652557 - 655289 | 100190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
