Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | EBF16_RS00610 | Not Available | Positive | 120598 - 122673 | 74183.0 |
| duf1656 domain-containing protein | EBF16_RS00615 | Not Available | Positive | 122670 - 122861 | 6980.99 |
| efflux rnd transporter periplasmic adaptor subunit | EBF16_RS00620 | Not Available | Positive | 122871 - 123782 | 32844.7 |
| efflux transporter outer membrane subunit | EBF16_RS00625 | Not Available | Positive | 123791 - 125278 | 53894.1 |
| metal-sensitive transcriptional regulator | EBF16_RS29120 | Not Available | Negative | 125238 - 125438 | 7339.88 |
| atp-binding protein | EBF16_RS00635 | Not Available | Positive | 125614 - 126797 | 41486.3 |
| arsr/smtb family transcription factor | EBF16_RS00640 | Not Available | Positive | 126885 - 127235 | 12931.5 |
| copper resistance protein b | EBF16_RS00645 | Not Available | Negative | 127397 - 128608 | 42598.9 |
| hypothetical protein | EBF16_RS28375 | Not Available | Negative | 128605 - 128916 | 10751.0 |
| copper resistance system multicopper oxidase | EBF16_RS00650 | Not Available | Negative | 128913 - 130745 | 66790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
