Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EBF16_RS06980 | Not Available | Positive | 622188 - 622673 | 17117.2 |
| rna polymerase sigma factor rpoh | EBF16_RS06985 | Not Available | Negative | 622731 - 623645 | 34827.8 |
| rlua family pseudouridine synthase | EBF16_RS06990 | Not Available | Negative | 623724 - 624674 | 34121.4 |
| m67 family metallopeptidase | EBF16_RS06995 | Not Available | Positive | 624692 - 625093 | 13682.5 |
| histidine phosphotransferase family protein | EBF16_RS07000 | Not Available | Positive | 625185 - 625838 | 22750.9 |
| duf4269 domain-containing protein | EBF16_RS07005 | Not Available | Negative | 625855 - 626364 | 18707.5 |
| nad(p)h-dependent flavin oxidoreductase | EBF16_RS07010 | Not Available | Negative | 626361 - 627410 | 35349.6 |
| helix-turn-helix domain-containing protein | EBF16_RS07015 | Not Available | Negative | 627454 - 627756 | 10667.7 |
| type i glutamate--ammonia ligase | EBF16_RS07020 | Not Available | Negative | 627877 - 629289 | 52400.4 |
| p-ii family nitrogen regulator | EBF16_RS07025 | Not Available | Negative | 629384 - 629722 | 12169.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
