Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trigger factor | EBF16_RS06930 | Not Available | Positive | 609375 - 610964 | 57760.2 |
| hypothetical protein | EBF16_RS06935 | Not Available | Positive | 611221 - 612630 | 51461.6 |
| glycosyltransferase family 2 protein | EBF16_RS06940 | Not Available | Positive | 612673 - 613644 | 35528.4 |
| hded family acid-resistance protein | EBF16_RS06945 | Not Available | Negative | 613626 - 614255 | 22381.5 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | EBF16_RS06950 | Not Available | Positive | 614387 - 615022 | 23312.2 |
| atp-dependent clp protease atp-binding subunit clpx | EBF16_RS06955 | Not Available | Positive | 615156 - 616424 | 45855.4 |
| tonb-dependent receptor | EBF16_RS06960 | Not Available | Positive | 616791 - 619271 | 88109.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | EBF16_RS06965 | Not Available | Negative | 619484 - 620197 | 25862.5 |
| mfs transporter | EBF16_RS06970 | Not Available | Negative | 620242 - 621531 | 45633.0 |
| tetr/acrr family transcriptional regulator | EBF16_RS06975 | Not Available | Positive | 621643 - 622191 | 19186.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
