Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS06880 | Not Available | Negative | 603440 - 603826 | 13803.8 |
| endonuclease iii | EBF16_RS06885 | Not Available | Negative | 603905 - 604564 | 24225.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EBF16_RS06890 | Not Available | Negative | 604569 - 605333 | 25606.6 |
| fumarylacetoacetate hydrolase family protein | EBF16_RS06895 | Not Available | Positive | 605443 - 606126 | 23906.6 |
| polyhydroxyalkanoic acid system family protein | EBF16_RS06900 | Not Available | Positive | 606147 - 606449 | 11102.7 |
| nad-dependent deacylase | EBF16_RS06905 | Not Available | Positive | 606473 - 607174 | 24855.5 |
| fecr family protein | EBF16_RS06910 | Not Available | Negative | 607181 - 608212 | 37083.8 |
| rna polymerase sigma factor | EBF16_RS06915 | Not Available | Negative | 608130 - 608735 | 22859.6 |
| hypothetical protein | EBF16_RS06920 | Not Available | Negative | 608907 - 609107 | 7012.89 |
| Trna-leu | Not Available | Not Available | Positive | 609227 - 609311 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
