Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | EBF16_RS06835 | Not Available | Positive | 589746 - 591176 | 51965.8 |
| m16 family metallopeptidase | EBF16_RS06840 | Not Available | Positive | 591385 - 594282 | 104406.0 |
| hypothetical protein | EBF16_RS28505 | Not Available | Negative | 594292 - 594462 | 6499.58 |
| metal-dependent hydrolase family protein | EBF16_RS06845 | Not Available | Positive | 594691 - 595971 | 45107.1 |
| tetr/acrr family transcriptional regulator | EBF16_RS06850 | Not Available | Negative | 596019 - 596606 | 21451.5 |
| efflux rnd transporter periplasmic adaptor subunit | EBF16_RS06855 | Not Available | Positive | 596723 - 597931 | 41744.9 |
| efflux rnd transporter permease subunit | EBF16_RS06860 | Not Available | Positive | 597935 - 601114 | 113543.0 |
| efflux transporter outer membrane subunit | EBF16_RS06865 | Not Available | Positive | 601117 - 602535 | 50664.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EBF16_RS06870 | Not Available | Positive | 602630 - 603169 | 19082.7 |
| Trna-arg | Not Available | Not Available | Positive | 603288 - 603364 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
