Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription factor jumonji, jmjc | EBF16_RS06740 | Not Available | Negative | 573315 - 574151 | 30650.7 |
| hypothetical protein | EBF16_RS28500 | Not Available | Negative | 574148 - 574423 | 10566.8 |
| universal stress protein | EBF16_RS06745 | Not Available | Negative | 574579 - 575034 | 15715.9 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | EBF16_RS06750 | Not Available | Positive | 575224 - 576528 | 44102.5 |
| acyl-coa thioesterase | EBF16_RS06755 | Not Available | Positive | 576528 - 576929 | 14556.4 |
| dihydrolipoyl dehydrogenase | EBF16_RS06760 | Not Available | Positive | 576971 - 578386 | 50447.2 |
| phosphatase pap2 family protein | EBF16_RS06765 | Not Available | Positive | 578364 - 579005 | 22650.4 |
| duf2142 domain-containing protein | EBF16_RS06770 | Not Available | Negative | 578979 - 580421 | 51176.5 |
| hypothetical protein | EBF16_RS06775 | Not Available | Positive | 580524 - 581213 | 25637.4 |
| hemolysin family protein | EBF16_RS06780 | Not Available | Negative | 581241 - 582188 | 34402.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
