Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS06645 | Not Available | Negative | 547165 - 547896 | 25862.9 |
| aldehyde dehydrogenase family protein | EBF16_RS06650 | Not Available | Negative | 547893 - 549308 | 49890.8 |
| lysr family transcriptional regulator | EBF16_RS06655 | Not Available | Positive | 549409 - 550332 | 32889.1 |
| is5/is1182 family transposase | EBF16_RS29235 | Not Available | Positive | 550547 - 550791 | 8946.84 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | EBF16_RS06660 | Not Available | Positive | 550867 - 551697 | 30629.6 |
| glycoside hydrolase family 68 protein | EBF16_RS06665 | Not Available | Positive | 552013 - 553104 | 39231.0 |
| rok family protein | EBF16_RS06670 | Not Available | Positive | 553101 - 554015 | 31539.2 |
| alpha-galactosidase | EBF16_RS06675 | Not Available | Positive | 554126 - 556228 | 77624.6 |
| putative 2og-fe(ii) oxygenase | EBF16_RS06680 | Not Available | Negative | 556233 - 557777 | 55649.2 |
| tonb-dependent receptor domain-containing protein | EBF16_RS06685 | Not Available | Positive | 557967 - 560477 | 89256.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
