Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EBF16_RS06340 | Not Available | Negative | 485119 - 486315 | 41322.7 |
| eama family transporter | EBF16_RS06345 | Not Available | Positive | 486500 - 487372 | 30114.2 |
| l,d-transpeptidase family protein | EBF16_RS06350 | Not Available | Negative | 487379 - 488059 | 23801.8 |
| nadp-dependent malic enzyme | EBF16_RS06355 | Not Available | Negative | 488120 - 490387 | 80959.8 |
| lysr family transcriptional regulator | EBF16_RS06360 | Not Available | Negative | 490415 - 491332 | 33292.1 |
| malate synthase g | EBF16_RS06365 | Not Available | Positive | 491429 - 493543 | 75894.0 |
| glutathione s-transferase family protein | EBF16_RS06370 | Not Available | Positive | 493609 - 494235 | 23326.2 |
| m24 family metallopeptidase | EBF16_RS06375 | Not Available | Positive | 494222 - 495481 | 45228.7 |
| alanine--trna ligase | EBF16_RS06380 | Not Available | Positive | 495686 - 498424 | 98464.5 |
| nucleoside 2-deoxyribosyltransferase domain-containing protein | EBF16_RS06385 | Not Available | Positive | 498429 - 499019 | 21388.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
