Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | EBF16_RS06290 | Not Available | Positive | 474262 - 476661 | 87370.8 |
| hu family dna-binding protein | EBF16_RS06295 | Not Available | Positive | 476825 - 477097 | 9378.13 |
| septal ring lytic transglycosylase rlpa family protein | EBF16_RS06300 | Not Available | Positive | 477338 - 477922 | 20632.7 |
| Trna-his | Not Available | Not Available | Positive | 478005 - 478081 | Not Available |
| tonb-dependent receptor | EBF16_RS06310 | Not Available | Negative | 478336 - 480612 | 80919.5 |
| phosphoribosyl-amp cyclohydrolase | EBF16_RS06315 | Not Available | Positive | 480853 - 481239 | 13863.4 |
| hypothetical protein | EBF16_RS06320 | Not Available | Positive | 481226 - 481759 | 18421.8 |
| m20/m25/m40 family metallo-hydrolase | EBF16_RS06325 | Not Available | Negative | 481810 - 483114 | 45244.3 |
| yitt family protein | EBF16_RS06330 | Not Available | Negative | 483187 - 483846 | 22802.8 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | EBF16_RS06335 | Not Available | Negative | 483942 - 485078 | 41553.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
