Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gbsr/marr family transcriptional regulator | EBF16_RS06030 | Not Available | Negative | 418006 - 418551 | 20741.1 |
| alanine racemase | EBF16_RS06035 | Not Available | Positive | 418701 - 419858 | 40336.2 |
| rida family protein | EBF16_RS06040 | Not Available | Positive | 419858 - 420244 | 13538.3 |
| thua domain-containing protein | EBF16_RS06045 | Not Available | Positive | 420316 - 421083 | 28918.6 |
| dicarboxylate/amino acid:cation symporter | EBF16_RS06050 | Not Available | Negative | 421120 - 422421 | 44299.3 |
| m20/m25/m40 family metallo-hydrolase | EBF16_RS06060 | Not Available | Positive | 422616 - 423983 | 47800.6 |
| 2-isopropylmalate synthase | EBF16_RS06065 | Not Available | Negative | 424102 - 425775 | 61168.1 |
| ycei family protein | EBF16_RS06070 | Not Available | Negative | 426006 - 426611 | 21308.7 |
| ycei family protein | EBF16_RS06075 | Not Available | Negative | 426616 - 427251 | 21792.4 |
| ketol-acid reductoisomerase | EBF16_RS06080 | Not Available | Negative | 427367 - 428386 | 36399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
