Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex e1 component subunit beta | EBF16_RS05980 | Not Available | Positive | 408598 - 409965 | 48425.2 |
| tade/tadg family type iv pilus assembly protein | EBF16_RS05985 | Not Available | Negative | 410030 - 410692 | 23590.0 |
| tade/tadg family type iv pilus assembly protein | EBF16_RS05990 | Not Available | Negative | 410689 - 411222 | 18881.2 |
| tade/tadg family type iv pilus assembly protein | EBF16_RS05995 | Not Available | Negative | 411282 - 413276 | 71289.8 |
| hypothetical protein | EBF16_RS06000 | Not Available | Positive | 413416 - 414075 | 23880.0 |
| hypothetical protein | EBF16_RS06005 | Not Available | Positive | 414121 - 414585 | 16469.5 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | EBF16_RS06010 | Not Available | Negative | 414602 - 415948 | 48587.2 |
| hypothetical protein | EBF16_RS06015 | Not Available | Negative | 416072 - 416479 | 14213.8 |
| hypothetical protein | EBF16_RS06020 | Not Available | Negative | 416530 - 416901 | 13491.6 |
| srpbcc family protein | EBF16_RS06025 | Not Available | Negative | 416922 - 417944 | 37536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
