Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | EBF16_RS05730 | Not Available | Positive | 359522 - 360214 | 24340.8 |
| duf1622 domain-containing protein | EBF16_RS05735 | Not Available | Positive | 360335 - 360703 | 13311.4 |
| l,d-transpeptidase family protein | EBF16_RS05740 | Not Available | Positive | 360752 - 361870 | 40233.8 |
| m23 family metallopeptidase | EBF16_RS05745 | Not Available | Positive | 361867 - 362433 | 19868.8 |
| elongation factor p | EBF16_RS05750 | Not Available | Positive | 362648 - 363211 | 21075.4 |
| hypothetical protein | EBF16_RS05755 | Not Available | Positive | 363211 - 363567 | 12196.8 |
| inositol monophosphatase family protein | EBF16_RS05760 | Not Available | Positive | 363604 - 364416 | 29683.3 |
| nadh-quinone oxidoreductase subunit a | EBF16_RS05765 | Not Available | Positive | 364713 - 365087 | 14054.4 |
| nuob/complex i 20 kda subunit family protein | EBF16_RS05770 | Not Available | Positive | 365114 - 365632 | 19253.4 |
| is5/is1182 family transposase | EBF16_RS05775 | Not Available | Positive | 365634 - 366239 | 23102.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
