Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | Sphingobium yanoikuyae SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | EBF16_RS05250 | Not Available | Positive | 269885 - 270349 | 17088.8 |
| fad-dependent oxidoreductase | EBF16_RS05255 | Not Available | Negative | 270300 - 271967 | 58905.1 |
| response regulator | EBF16_RS05260 | Not Available | Positive | 272173 - 275586 | 124793.0 |
| cher family methyltransferase | EBF16_RS05265 | Not Available | Positive | 275571 - 276446 | 33232.4 |
| response regulator | EBF16_RS05270 | Not Available | Positive | 276436 - 278253 | 65932.8 |
| Trna-pseudo | Not Available | Not Available | Positive | 278425 - 278495 | Not Available |
| hypothetical protein | EBF16_RS05275 | Not Available | Positive | 278647 - 279138 | 18469.0 |
| hypothetical protein | EBF16_RS05280 | Not Available | Positive | 279138 - 279674 | 20551.0 |
| prtrc system parb family protein | EBF16_RS05285 | Not Available | Positive | 279671 - 280981 | 46615.4 |
| prtrc system protein e | EBF16_RS05290 | Not Available | Positive | 280986 - 281402 | 13871.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
