Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | KR76_RS03555 | Not Available | Positive | 742612 - 743346 | 26088.7 |
| proline dehydrogenase family protein | KR76_RS03560 | Not Available | Positive | 743381 - 744208 | 29404.5 |
| pyrroline-5-carboxylate reductase | KR76_RS03565 | Not Available | Positive | 744205 - 745023 | 28367.2 |
| had family hydrolase | KR76_RS03570 | Not Available | Negative | 745035 - 745724 | 24902.7 |
| tryptophan--trna ligase | KR76_RS03575 | Not Available | Negative | 745774 - 746730 | 34308.2 |
| tetr/acrr family transcriptional regulator | KR76_RS03580 | Not Available | Negative | 746892 - 747503 | 21382.6 |
| hypothetical protein | KR76_RS03585 | Not Available | Negative | 747500 - 747919 | 15327.3 |
| mfs transporter | KR76_RS03590 | Not Available | Negative | 747916 - 749337 | 46347.0 |
| helix-turn-helix domain-containing protein | KR76_RS03595 | Not Available | Positive | 749634 - 749849 | 8068.69 |
| 30s ribosomal protein bs22 | KR76_RS28840 | Not Available | Positive | 750026 - 750127 | 4073.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
