Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 367195 - 367207 | Not Available |
| Integrase | KR76_RS01705 | Not Available | Positive | 367364 - 368650 | 47092.6 |
| tigr04255 family protein | KR76_RS01710 | Not Available | Positive | 368776 - 369561 | 28802.4 |
| hypothetical protein | KR76_RS01715 | Not Available | Positive | 369558 - 370139 | 21797.1 |
| hypothetical protein | KR76_RS01720 | Not Available | Positive | 370136 - 370579 | 16435.3 |
| Metallopeptidase | KR76_RS01725 | Not Available | Negative | 370728 - 371159 | 16471.7 |
| helix-turn-helix domain-containing protein | KR76_RS01730 | Not Available | Negative | 371162 - 371488 | 11460.3 |
| helix-turn-helix domain-containing protein | KR76_RS01735 | Not Available | Positive | 371581 - 371829 | 8481.24 |
| helix-turn-helix domain-containing protein | KR76_RS29350 | Not Available | Positive | 371829 - 372041 | 7819.35 |
| hypothetical protein | KR76_RS01740 | Not Available | Positive | 372059 - 372337 | 10153.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
