Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | KR76_RS22825 | Not Available | Negative | 4623462 - 4624781 | 45536.1 |
| hypothetical protein | KR76_RS22830 | Not Available | Positive | 4624904 - 4625884 | 36194.2 |
| hypothetical protein | KR76_RS22835 | Not Available | Positive | 4625881 - 4626615 | 26649.1 |
| fkbm family methyltransferase | KR76_RS22840 | Not Available | Negative | 4626620 - 4627510 | 31994.8 |
| methyltransferase domain-containing protein | KR76_RS22845 | Not Available | Positive | 4627757 - 4628833 | 40088.7 |
| gdp-mannose 4,6-dehydratase | KR76_RS22850 | Not Available | Negative | 4628874 - 4629866 | 36926.5 |
| glycosyltransferase | KR76_RS22855 | Not Available | Positive | 4629933 - 4630967 | 37025.0 |
| class i sam-dependent methyltransferase | KR76_RS22860 | Not Available | Positive | 4631030 - 4631920 | 32340.4 |
| gdp-mannose 4,6-dehydratase | KR76_RS22865 | Not Available | Negative | 4631937 - 4632920 | 34728.4 |
| nad-dependent epimerase/dehydratase family protein | KR76_RS22870 | Not Available | Positive | 4633058 - 4634041 | 35951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
