Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | KR76_RS31000 | Not Available | Positive | 4495279 - 4495425 | 5451.56 |
| amidohydrolase family protein | KR76_RS22190 | Not Available | Negative | 4495660 - 4496460 | 28674.2 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS22195 | Not Available | Negative | 4496498 - 4497247 | 25539.9 |
| acyl-coa dehydrogenase family protein | KR76_RS22200 | Not Available | Negative | 4497247 - 4498374 | 39704.6 |
| acyl-coa dehydrogenase family protein | KR76_RS22205 | Not Available | Negative | 4498441 - 4499595 | 41341.5 |
| thiolase family protein | KR76_RS22210 | Not Available | Positive | 4499697 - 4500893 | 41587.6 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS22215 | Not Available | Positive | 4500917 - 4501675 | 25920.2 |
| crotonase/enoyl-coa hydratase family protein | KR76_RS22220 | Not Available | Positive | 4501672 - 4502481 | 28686.7 |
| zinc-binding dehydrogenase | KR76_RS22225 | Not Available | Positive | 4502466 - 4503440 | 33049.8 |
| fad-dependent oxidoreductase | KR76_RS22230 | Not Available | Negative | 4503451 - 4505433 | 70750.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
