Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | KR76_RS21400 | Not Available | Negative | 4332855 - 4334114 | 45481.1 |
| xdhc family protein | KR76_RS21405 | Not Available | Negative | 4334170 - 4335288 | 39426.9 |
| vwa domain-containing protein | KR76_RS21410 | Not Available | Negative | 4335295 - 4336428 | 41058.9 |
| aaa family atpase | KR76_RS21415 | Not Available | Negative | 4336436 - 4337314 | 32526.8 |
| hypothetical protein | KR76_RS21420 | Not Available | Negative | 4337369 - 4337584 | 7409.41 |
| ntp transferase domain-containing protein | KR76_RS30985 | Not Available | Negative | 4337795 - 4338373 | 19302.0 |
| luxr family transcriptional regulator | KR76_RS30990 | Not Available | Negative | 4338370 - 4338696 | 11572.6 |
| hypothetical protein | KR76_RS21435 | Not Available | Positive | 4338914 - 4339621 | 23766.9 |
| chaperonin groel | KR76_RS21440 | Not Available | Negative | 4339696 - 4341327 | 56564.8 |
| rimk family alpha-l-glutamate ligase | KR76_RS21445 | Not Available | Negative | 4341441 - 4342298 | 30185.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
