Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | KR76_RS21110 | Not Available | Negative | 4283181 - 4284203 | 36973.7 |
| 30s ribosomal protein s4 | KR76_RS21115 | Not Available | Negative | 4284341 - 4284949 | 23572.5 |
| 30s ribosomal protein s11 | KR76_RS21120 | Not Available | Negative | 4284981 - 4285382 | 14103.1 |
| 30s ribosomal protein s13 | KR76_RS21125 | Not Available | Negative | 4285442 - 4285816 | 14172.3 |
| 50s ribosomal protein l36 | KR76_RS21130 | Not Available | Negative | 4285987 - 4286100 | 4373.59 |
| translation initiation factor if-1 | KR76_RS21135 | Not Available | Negative | 4286143 - 4286364 | 8412.39 |
| llm class flavin-dependent oxidoreductase | KR76_RS21140 | Not Available | Negative | 4286537 - 4287583 | 36803.1 |
| fha domain-containing protein | KR76_RS21145 | Not Available | Negative | 4287655 - 4290081 | 85471.7 |
| terc family protein | KR76_RS21150 | Not Available | Negative | 4290209 - 4291264 | 38996.8 |
| isochorismate synthase menf | KR76_RS21155 | Not Available | Negative | 4291467 - 4292609 | 39412.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
