Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 3 protein | KR76_RS21060 | Not Available | Negative | 4273308 - 4274738 | 47532.8 |
| carbohydrate abc transporter permease | KR76_RS21065 | Not Available | Negative | 4274735 - 4275577 | 30622.3 |
| carbohydrate abc transporter permease | KR76_RS21070 | Not Available | Negative | 4275577 - 4276476 | 32794.8 |
| extracellular solute-binding protein | KR76_RS21075 | Not Available | Negative | 4276520 - 4277794 | 44244.5 |
| rok family transcriptional regulator | KR76_RS21080 | Not Available | Negative | 4277842 - 4278966 | 38539.4 |
| abc transporter atp-binding protein | KR76_RS21085 | Not Available | Positive | 4279061 - 4280140 | 38522.5 |
| duf6542 domain-containing protein | KR76_RS21090 | Not Available | Positive | 4280160 - 4280591 | 15071.5 |
| l-threonylcarbamoyladenylate synthase | KR76_RS21095 | Not Available | Negative | 4280677 - 4281294 | 22828.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | KR76_RS21100 | Not Available | Negative | 4281294 - 4282310 | 36380.9 |
| 50s ribosomal protein l17 | KR76_RS21105 | Not Available | Negative | 4282402 - 4282971 | 20277.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
