Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-regulated atpase ychf | KR76_RS21015 | Not Available | Negative | 4261898 - 4262971 | 38343.8 |
| m57 family metalloprotease | KR76_RS21020 | Not Available | Negative | 4263080 - 4263934 | 30437.9 |
| exodeoxyribonuclease iii | KR76_RS21025 | Not Available | Positive | 4264116 - 4264898 | 29180.1 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | KR76_RS21030 | Not Available | Positive | 4265006 - 4266958 | 66756.8 |
| hypothetical protein | KR76_RS21035 | Not Available | Positive | 4266939 - 4268591 | 58458.1 |
| glycosyltransferase | KR76_RS21040 | Not Available | Positive | 4268593 - 4270071 | 54523.3 |
| hypothetical protein | KR76_RS30600 | Not Available | Positive | 4270014 - 4270505 | 18390.9 |
| glucosamine-6-phosphate deaminase | KR76_RS21045 | Not Available | Negative | 4270509 - 4271294 | 27155.3 |
| n-acetylglucosamine-6-phosphate deacetylase | KR76_RS21050 | Not Available | Negative | 4271294 - 4272409 | 37020.6 |
| rok family protein | KR76_RS21055 | Not Available | Negative | 4272406 - 4273296 | 28789.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
